C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein cytoplasmic 1 light intermediate chain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047404 Dync1li1-201 ENSMUSG00000032435 10090 + 9:114688790-114724302 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047404 10.339±1.52 4.530±1.30 12.138±0.45 30.946±2.67 6.549±1.68 7.211±2.48 11.617±2.37 12.652±1.53 5.502±3.32 10.418±1.27 9.913±0.41 9.458±5.91 20.353±6.27 2.716±0.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0000922 ISS spindle pole
GO:0003777 ISS microtubule motor activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0007018 ISS microtubule-based movement
GO:0007067 IEA mitotic nuclear division
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0090267 ISS positive regulation of mitotic cell cycle spindle assembly checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273130 DYNC1LI1-001 protein_coding Homo_sapiens 0 1868
ENST00000413350 DYNC1LI1-008 protein_coding Homo_sapiens 0 525
ENST00000424991 DYNC1LI1-006 protein_coding Homo_sapiens 0 311
ENST00000432458 DYNC1LI1-003 protein_coding Homo_sapiens 0 1153
ENST00000472985 DYNC1LI1-004 retained_intron Homo_sapiens 0 616
ENST00000474077 DYNC1LI1-007 retained_intron Homo_sapiens 0 215
ENST00000475193 DYNC1LI1-005 retained_intron Homo_sapiens 0 446
ENST00000481915 DYNC1LI1-002 retained_intron Homo_sapiens 0 1149
ENST00000502347 RP11-136H13.2-001 processed_pseudogene Homo_sapiens 2e-25 119

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