C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocator protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047419 Tspo-201 ENSMUSG00000041736 10090 + 15:83563573-83574201 protein_coding

Mus musculus EnsemblGRCm38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047419
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047419 388.693±160.75 761.484±85.48 117.699±26.49 2.845±0.76 466.066±191.31 226.339±12.02 50.837±16.93 174.716±6.95 99.194±19.73 215.777±47.45 15.481±3.84 142.029±60.20 20.047±9.40 7.897±3.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LG CIL_0008LG_0002 VISTA 15:83223007-83824071
CIL_0008W4 CIL_0008W4_0002 VISTA 15:83338828-83940718
CIL_00046C CIL_00046C_0002 CGP 15:83546797-83574201
CIL_0004LQ CIL_0004LQ_0002 CGP 15:83563573-83595157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005497 IEA androgen binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0006694 IEA steroid biosynthetic process
GO:0006811 IEA ion transport
GO:0006821 IEA chloride transport
GO:0006869 IEA lipid transport
GO:0007268 IEA synaptic transmission
GO:0007568 IEA aging
GO:0008347 IEA glial cell migration
GO:0008503 IEA benzodiazepine receptor activity
GO:0010042 IEA response to manganese ion
GO:0010266 IEA response to vitamin B1
GO:0010940 IEA positive regulation of necrotic cell death
GO:0014012 IEA peripheral nervous system axon regeneration
GO:0016021 IEA integral component of membrane
GO:0030325 IEA adrenal gland development
GO:0031965 IEA nuclear membrane
GO:0032570 IEA response to progesterone
GO:0032720 IEA negative regulation of tumor necrosis factor production
GO:0033574 IEA response to testosterone
GO:0042493 IEA response to drug
GO:0043065 IEA positive regulation of apoptotic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045019 IEA negative regulation of nitric oxide biosynthetic process
GO:0048265 IEA response to pain
GO:0048266 IEA behavioral response to pain
GO:0048678 IEA response to axon injury
GO:0050810 IEA regulation of steroid biosynthetic process
GO:0051901 IEA positive regulation of mitochondrial depolarization
GO:0051928 IEA positive regulation of calcium ion transport
GO:0060242 IEA contact inhibition
GO:0060252 IEA positive regulation of glial cell proliferation
GO:0060253 IEA negative regulation of glial cell proliferation
GO:0070062 IEA extracellular vesicular exosome
GO:0071222 IEA cellular response to lipopolysaccharide
GO:0071294 IEA cellular response to zinc ion
GO:0071476 IEA cellular hypotonic response
GO:2000379 IEA positive regulation of reactive oxygen species metabolic process

Homologs

No Homologs available.

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