C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cAMP responsive element binding protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047450 Creb5-201 ENSMUSG00000053007 10090 + 6:53573384-53696007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047450
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047450 2.385±1.09 0.340±0.19 0.277±0.05 2.162±1.05 0.665±0.28 0.632±0.30 0.153±0.04 0.034±0.02 0.889±0.15 0.142±0.04 1.264±0.93 0.260±0.34 0.099±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZL CIL_0003ZL_0002 CGP 6:52768797-53696007
CIL_0008MY CIL_0008MY_0002 VISTA 6:53168299-53772380
CIL_0003ZK CIL_0003ZK_0002 CGP 6:53573384-53820830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding
GO:0045444 IGI fat cell differentiation
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0060612 IGI adipose tissue development
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357727 CREB5-001 protein_coding Homo_sapiens 0 2471
ENST00000396298 CREB5-003 protein_coding Homo_sapiens 0 2139
ENST00000396299 CREB5-005 protein_coding Homo_sapiens 0 2058
ENST00000396300 CREB5-002 protein_coding Homo_sapiens 0 2058
ENST00000409603 CREB5-004 protein_coding Homo_sapiens 0 1875
ENST00000426500 CREB5-012 protein_coding Homo_sapiens 0 944
ENST00000461921 CREB5-013 processed_transcript Homo_sapiens 0 359
ENST00000468391 CREB5-011 retained_intron Homo_sapiens 0 440
ENST00000468813 CREB5-010 processed_transcript Homo_sapiens 0.00000008 58
ENST00000484383 CREB5-014 processed_transcript Homo_sapiens 0 440
ENST00000498316 CREB5-015 protein_coding Homo_sapiens 0 520

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