C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RUN domain containing 3B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047485 Rundc3b-001 ENSMUSG00000040570 10090 - 5:8490334-8622952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047485
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047485 0.478±0.25 0.365±0.04 0.081±0.00 8.633±3.48 0.201±0.12 1.929±0.59 0.053±0.01 0.242±0.10 0.065±0.03 0.185±0.07 0.025±0.02 0.709±0.37 0.578±0.38 0.764±0.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312373 RUNDC3B-008 retained_intron Homo_sapiens 0 1269
ENST00000338056 RUNDC3B-001 protein_coding Homo_sapiens 0 905
ENST00000394654 RUNDC3B-003 protein_coding Homo_sapiens 0 1284
ENST00000466676 RUNDC3B-006 processed_transcript Homo_sapiens 0 510
ENST00000476114 RUNDC3B-009 retained_intron Homo_sapiens 0 573
ENST00000489461 RUNDC3B-004 processed_transcript Homo_sapiens 0 717
ENST00000493037 RUNDC3B-002 protein_coding Homo_sapiens 0 1650
ENST00000496000 RUNDC3B-007 processed_transcript Homo_sapiens 0 436
ENST00000497788 RUNDC3B-005 processed_transcript Homo_sapiens 0 342

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