C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047526 Asap3-001 ENSMUSG00000036995 10090 + 4:136206365-136245216 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047526
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047526 3.880±0.31 1.597±0.63 5.526±0.40 1.610±0.23 3.533±1.27 1.749±0.29 2.620±0.69 1.953±0.66 2.190±1.14 3.022±1.12 0.576±0.21 2.889±1.21 7.742±3.37 1.900±0.63

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 ISS ruffle
GO:0005737 IEA cytoplasm
GO:0005925 ISS focal adhesion
GO:0008060 ISS ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0016477 ISS cell migration
GO:0032850 ISS positive regulation of ARF GTPase activity
GO:0051492 ISS regulation of stress fiber assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336689 ASAP3-001 protein_coding Homo_sapiens 0 2466
ENST00000437606 ASAP3-011 protein_coding Homo_sapiens 0 1980
ENST00000465372 ASAP3-006 protein_coding Homo_sapiens 3e-38 163
ENST00000475814 ASAP3-009 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000478858 ASAP3-010 retained_intron Homo_sapiens 0 640
ENST00000484418 ASAP3-008 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000492982 ASAP3-007 nonsense_mediated_decay Homo_sapiens 0 1967
ENST00000495646 ASAP3-005 protein_coding Homo_sapiens 0 880
ENST00000530874 ASAP3-013 retained_intron Homo_sapiens 0 449

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