C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BR serine/threonine kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048248 Brsk1-001 ENSMUSG00000035390 10090 + 7:4690928-4715997 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048248
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048248 2.302±1.22 1.497±0.22 3.719±0.12 63.733±41.99 0.795±0.22 1.297±0.30 0.296±0.13 0.391±0.15 0.117±0.08 0.844±0.07 0.336±0.01 2.342±0.72 0.497±0.14 13.322±5.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000A2 CIL_0000A2_0002 CGP 7:4660521-4715997
CIL_00009Z CIL_00009Z_0002 CGP 7:4690604-4725249

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005813 IDA centrosome
GO:0005886 IEA plasma membrane
GO:0006468 IEA:ISS protein phosphorylation
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007269 ISS neurotransmitter secretion
GO:0007409 IMP axonogenesis
GO:0008021 ISS synaptic vesicle
GO:0009411 ISS response to UV
GO:0019901 IPI protein kinase binding
GO:0030010 IGI establishment of cell polarity
GO:0030054 IEA cell junction
GO:0030182 IGI neuron differentiation
GO:0031572 ISS G2 DNA damage checkpoint
GO:0043015 IDA gamma-tubulin binding
GO:0048812 IGI neuron projection morphogenesis
GO:0050321 IDA tau-protein kinase activity
GO:0051298 IMP centrosome duplication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309383 BRSK1-001 protein_coding Homo_sapiens 0 3855
ENST00000326848 BRSK1-003 protein_coding Homo_sapiens 0 2418
ENST00000585418 BRSK1-002 protein_coding Homo_sapiens 0 1434
ENST00000586626 BRSK1-007 retained_intron Homo_sapiens 0 335
ENST00000588584 BRSK1-008 processed_transcript Homo_sapiens 0 761
ENST00000590333 BRSK1-004 protein_coding Homo_sapiens 0 3520
ENST00000591774 BRSK1-006 protein_coding Homo_sapiens 0 608
ENST00000592539 BRSK1-005 nonsense_mediated_decay Homo_sapiens 0 396

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