C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patched domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048691 Ptchd4-201 ENSMUSG00000042256 10090 + 17:42315947-42507741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048691
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048691 0.141±0.04 0.071±0.03 0.013±0.00 0.132±0.00 0.178±0.03 0.023±0.01 0.007±0.00 0.044±0.01 0.002±0.00 0.013±0.01 0.009±0.00 0.043±0.03 0.010±0.00 0.009±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0008158 IEA hedgehog receptor activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339488 PTCHD4-002 protein_coding Homo_sapiens 0 3184
ENST00000398738 PTCHD4-001 protein_coding Homo_sapiens 0 741
ENST00000619841 RP1-281E18.1-001 processed_pseudogene Homo_sapiens 0 507

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