C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 9130019O22 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049052 9130019O22Rik-001 ENSMUSG00000030823 10090 - 7:127382260-127387166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049052
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049052 0.945±0.44 1.300±0.38 0.665±0.09 0.529±0.29 0.958±0.38 1.358±0.65 0.294±0.02 0.652±0.14 0.350±0.16 1.545±0.22 0.188±0.12 1.239±0.69 0.182±0.11 0.105±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U5 CIL_0000U5_0003 CGP 7:127372564-127387166
CIL_0000U5 CIL_0000U5_0002 CGP 7:127382260-127393629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223459 ZNF688-001 protein_coding Homo_sapiens 6e-34 150
ENST00000287461 ZNF689-001 protein_coding Homo_sapiens 5e-36 158
ENST00000563665 ZNF688-004 retained_intron Homo_sapiens 4e-32 143
ENST00000563707 ZNF688-005 protein_coding Homo_sapiens 8e-33 143
ENST00000567855 ZNF688-003 protein_coding Homo_sapiens 1e-34 150
ENST00000611647 ZNF689-201 protein_coding Homo_sapiens 4e-36 158

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