C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF-interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049348 Traip-201 ENSMUSG00000032586 10090 + 9:107950963-107972268 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049348 0.217±0.05 0.460±0.08 0.264±0.07 2.364±0.40 0.297±0.07 0.580±0.21 0.078±0.02 0.108±0.01 1.812±2.02 0.229±0.04 0.189±0.09 0.810±0.28 2.102±1.73 1.499±0.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005057 IPI receptor signaling protein activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007165 IDA signal transduction
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0035556 IPI intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331456 TRAIP-001 protein_coding Homo_sapiens 0 1417
ENST00000469027 TRAIP-005 protein_coding Homo_sapiens 0 479
ENST00000473195 TRAIP-004 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000473863 TRAIP-011 processed_transcript Homo_sapiens 0 403
ENST00000477546 TRAIP-002 retained_intron Homo_sapiens 0 529
ENST00000482243 TRAIP-009 protein_coding Homo_sapiens 0 560
ENST00000482582 TRAIP-007 protein_coding Homo_sapiens 0 737
ENST00000489948 TRAIP-010 retained_intron Homo_sapiens 0 254
ENST00000491060 TRAIP-003 retained_intron Homo_sapiens 0 213

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