C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 5430419D17 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050586 5430419D17Rik-001 ENSMUSG00000006204 10090 + 7:131174402-131250945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungOvaryTestisENSMUST00000050586
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Ovary Testis
ENSMUST00000050586 0.009±0.00 0.003±0.00 0.009±0.00 0.940±0.33 0.037±0.00 0.002±0.00 0.022±0.01 0.601±0.30 0.037±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0008DB CIL_0008DB_0002 VISTA 7:131163946-131765852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0005576 IEA extracellular region
GO:0006898 IEA receptor-mediated endocytosis
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000439464 DMBT1P1-001 processed_transcript Homo_sapiens 0 230

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