C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050901 Apof-201 ENSMUSG00000047631 10090 + 10:128267997-128270151 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000050901
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000050901 0.159±0.11 8.900±3.14 0.095±0.01 0.008±0.00 1.593±1.11 0.116±0.07 0.022±0.01 0.078±0.05 451.415±328.81 0.199±0.05 1.267±0.79 0.665±0.83 0.237±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006641 IMP triglyceride metabolic process
GO:0008203 IMP cholesterol metabolic process
GO:0033344 IGI cholesterol efflux
GO:0034362 IEA low-density lipoprotein particle
GO:0034364 IEA high-density lipoprotein particle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000453002 RPLP1P11-001 processed_pseudogene Homo_sapiens 4e-17 92
ENST00000470649 TTC19-010 protein_coding Homo_sapiens 1e-16 92

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