C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MIS18 binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052201 Mis18bp1-001 ENSMUSG00000047534 10090 - 12:65132734-65172580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052201
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052201 0.122±0.07 0.117±0.03 0.126±0.00 3.071±0.76 0.098±0.05 0.199±0.17 0.023±0.01 0.024±0.01 5.495±5.73 0.116±0.04 0.018±0.01 0.448±0.17 2.132±1.66 0.647±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046X CIL_00046X_0002 CGP 12:65075606-65172604

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0007067 IEA mitotic nuclear division
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310806 MIS18BP1-001 protein_coding Homo_sapiens 0 523
ENST00000453142 MIS18BP1-006 nonsense_mediated_decay Homo_sapiens 4e-31 139
ENST00000454990 MIS18BP1-002 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000469020 MIS18BP1-007 retained_intron Homo_sapiens 0 403
ENST00000554093 MIS18BP1-010 nonsense_mediated_decay Homo_sapiens 0 278

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