C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052515 Coro6-201 ENSMUSG00000020836 10090 + 11:77463836-77469601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052515
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052515 4.697±1.47 3.114±0.10 7.402±10.15 3.597±2.28 46.077±17.01 1.120±0.38 0.065±0.01 5.644±0.00 12.470±1.37 2.311±0.65 0.347±0.07 0.805±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015629 IBA actin cytoskeleton
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345068 CORO6-001 protein_coding Homo_sapiens 0 876
ENST00000388767 CORO6-201 protein_coding Homo_sapiens 0 870
ENST00000459686 CORO6-004 retained_intron Homo_sapiens 0 876
ENST00000467534 CORO6-005 retained_intron Homo_sapiens 0 246
ENST00000492276 CORO6-003 protein_coding Homo_sapiens 0 850
ENST00000579388 CORO6-007 retained_intron Homo_sapiens 0 736
ENST00000580212 CORO6-008 protein_coding Homo_sapiens 0 1631
ENST00000584602 CORO6-011 protein_coding Homo_sapiens 0 473
ENST00000584969 CORO6-009 protein_coding Homo_sapiens 0 870

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