C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell activation inhibitor, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052740 Tcaim-001 ENSMUSG00000046603 10090 + 9:122805539-122836334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052740
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052740 3.514±0.15 6.333±1.18 1.867±0.24 1.207±0.14 3.157±1.07 1.139±0.35 8.781±2.78 8.551±1.28 2.902±1.82 2.439±0.39 8.065±0.98 1.659±0.55 1.303±0.56 1.925±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JG CIL_0005JG_0002 CGP 9:122747346-122836334
CIL_0005JI CIL_0005JI_0002 CGP 9:122805539-122862128

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342649 TCAIM-001 protein_coding Homo_sapiens 0 1406
ENST00000412611 TCAIM-007 nonsense_mediated_decay Homo_sapiens 0 968
ENST00000417237 TCAIM-005 protein_coding Homo_sapiens 0 1378
ENST00000417768 TCAIM-014 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000431657 TCAIM-008 nonsense_mediated_decay Homo_sapiens 0 348

Loading