C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052907 Adamts19-201 ENSMUSG00000053441 10090 + 18:58836764-59053678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000052907
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052907 1.256±1.07 0.038±0.01 0.159±0.00 0.436±0.26 0.385±0.14 0.406±0.10 0.236±0.07 0.060±0.05 0.259±0.09 0.014±0.01 3.720±1.86 0.071±0.11 0.264±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041T CIL_00041T_0002 CGP 18:58659482-59053678
CIL_00041U CIL_00041U_0002 CGP 18:58836764-59076962

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274487 ADAMTS19-001 protein_coding Homo_sapiens 0 4442
ENST00000502709 ADAMTS19-002 nonsense_mediated_decay Homo_sapiens 0 483
ENST00000505791 ADAMTS19-003 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000509467 ADAMTS19-004 processed_transcript Homo_sapiens 0 730

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