C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 84
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053286 Ccdc84-201 ENSMUSG00000043923 10090 - 9:44410160-44418003 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryTestisENSMUST00000053286
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000053286 4.722±0.06 6.676±3.67 7.591±0.82 5.688±0.00 3.685±0.15 5.055±0.07 4.051±0.88 3.763±0.08 3.611±0.12 4.368±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334418 CCDC84-001 protein_coding Homo_sapiens 0 1050
ENST00000524670 CCDC84-004 retained_intron Homo_sapiens 0 492
ENST00000526463 CCDC84-002 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000527356 CCDC84-006 retained_intron Homo_sapiens 0 324
ENST00000532132 CCDC84-009 nonsense_mediated_decay Homo_sapiens 0 843
ENST00000533787 CCDC84-007 retained_intron Homo_sapiens 0 222
ENST00000534656 CCDC84-003 retained_intron Homo_sapiens 0 446
ENST00000583842 CCDC84-011 retained_intron Homo_sapiens 0 200
ENST00000603234 RP4-718P11.1-001 processed_pseudogene Homo_sapiens 0 366

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