C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054565 Ift43-201 ENSMUSG00000007867 10090 + 12:86082561-86162458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054565
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054565 7.940±1.55 5.554±1.29 14.094±0.00 6.523±0.77 6.364±2.34 6.505±1.88 10.953±2.06 5.823±3.06 2.101±0.74 14.869±4.49 1.648±1.05 12.539±4.86 31.202±32.58 60.079±9.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005815 IEA microtubule organizing center
GO:0015630 IEA microtubule cytoskeleton
GO:0030991 ISS intraciliary transport particle A
GO:0035721 ISS intraciliary retrograde transport
GO:0060271 ISS cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238628 IFT43-004 protein_coding Homo_sapiens 0 370
ENST00000314067 IFT43-201 protein_coding Homo_sapiens 0 370
ENST00000542766 IFT43-001 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000554026 IFT43-002 retained_intron Homo_sapiens 0 320
ENST00000555305 IFT43-003 retained_intron Homo_sapiens 0 292

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