C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Willebrand factor C and EGF domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055115 Vwce-201 ENSMUSG00000043789 10090 + 19:10634233-10665210 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055115 0.072±0.02 0.096±0.04 0.006±0.00 0.139±0.08 0.092±0.05 0.108±0.03 0.008±0.00 3.865±1.09 7.508±2.78 0.040±0.02 0.026±0.01 0.191±0.06 1.799±2.09 0.129±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301770 VWCE-002 nonsense_mediated_decay Homo_sapiens 0 1640
ENST00000335613 VWCE-001 protein_coding Homo_sapiens 0 2159
ENST00000535599 VWCE-003 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000535710 VWCE-004 protein_coding Homo_sapiens 0 725
ENST00000538438 VWCE-006 retained_intron Homo_sapiens 0 497
ENST00000538579 VWCE-007 retained_intron Homo_sapiens 0 577
ENST00000613271 VWCE-201 protein_coding Homo_sapiens 0 1953

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