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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 64
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055408 Ccdc64-001 ENSMUSG00000041609 10090 - 5:115648175-115731621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055408
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055408 2.276±0.80 1.147±0.12 12.120±0.05 3.870±0.05 2.694±0.80 2.562±1.37 9.852±1.91 0.374±0.08 2.400±0.53 0.094±0.00 2.023±0.63 21.458±19.51 1.192±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0017137 IDA Rab GTPase binding
GO:0031175 IMP neuron projection development
GO:0034452 IDA dynactin binding
GO:0055107 IMP Golgi to secretory granule transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397558 CCDC64-001 protein_coding Homo_sapiens 0 2220
ENST00000546420 CCDC64-002 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000546460 CCDC64-007 retained_intron Homo_sapiens 0 298
ENST00000546790 CCDC64-005 retained_intron Homo_sapiens 0 444
ENST00000546857 CCDC64-010 processed_transcript Homo_sapiens 0 311
ENST00000546861 CCDC64-003 processed_transcript Homo_sapiens 0 224
ENST00000547841 CCDC64-009 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000548673 CCDC64-011 protein_coding Homo_sapiens 0 562
ENST00000550197 CCDC64-006 retained_intron Homo_sapiens 0 364

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