C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055528 Zscan22-001 ENSMUSG00000054715 10090 + 7:12897815-12908239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055528
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055528 0.732±0.19 0.668±0.15 0.606±0.00 1.041±0.00 0.959±0.11 0.290±0.00 0.708±0.10 0.467±0.06 0.779±0.03 0.285±0.09 1.305±0.00 0.627±0.29 0.863±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329665 ZSCAN22-001 protein_coding Homo_sapiens 0 1016
ENST00000341976 ZNF70-001 protein_coding Homo_sapiens 4e-22 111
ENST00000439330 RP3-393P12.1-001 processed_pseudogene Homo_sapiens 0.00009 53

Loading