C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuronal PAS domain protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056129 Npas4-201 ENSMUSG00000045903 10090 - 19:4984355-4989971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056129
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056129 2.034±1.61 0.442±0.07 2.252±0.09 1.162±0.39 0.173±0.08 0.869±0.29 0.134±0.05 0.060±0.04 0.044±0.03 0.297±0.08 0.040±0.02 1.237±0.50 0.191±0.13 0.470±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0004871 IEA signal transducer activity
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311034 NPAS4-001 protein_coding Homo_sapiens 0 4346
ENST00000525148 NPAS4-002 nonsense_mediated_decay Homo_sapiens 0 2143
ENST00000622887 HUWE1-009 protein_coding Homo_sapiens 0.000005 58

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