C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 235
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056549 Zfp235-201 ENSMUSG00000047603 10090 + 7:24134174-24142266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056549
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056549 1.317±1.11 1.166±0.19 1.532±0.56 2.763±0.65 1.611±0.65 1.829±0.07 1.093±0.10 1.227±0.33 1.001±0.36 1.539±0.06 0.620±0.39 2.091±0.92 0.757±0.29 0.272±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UP CIL_0003UP_000B CGP 7:24112314-24142266

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000122468 CU672268.1-201 protein_coding Danio_rerio 0.0000003 62
ENSDART00000143505 si:ch73-92e7.6-001 protein_coding Danio_rerio 0.00004 55
ENSDART00000058053 CABZ01075191.1-201 protein_coding Danio_rerio 0.00004 55
ENSDART00000147576 si:dkey-1b17.5-001 protein_coding Danio_rerio 0.0002 53
ENST00000274599 ZNF300-201 protein_coding Homo_sapiens 0.00006 55
ENST00000291182 ZNF235-001 protein_coding Homo_sapiens 0 1459
ENST00000317398 ZNF671-001 protein_coding Homo_sapiens 0.0002 53
ENST00000322487 ZNF726-201 protein_coding Homo_sapiens 0.0000009 60
ENST00000335820 ZNF671-201 protein_coding Homo_sapiens 0.0002 53
ENST00000356555 ZNF300P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000007 60
ENST00000394226 ZNF300-001 protein_coding Homo_sapiens 0.00006 55
ENST00000418587 ZNF300-202 protein_coding Homo_sapiens 0.00006 55
ENST00000427179 ZNF300-002 protein_coding Homo_sapiens 0.00008 55
ENST00000446148 ZNF300-203 protein_coding Homo_sapiens 0.00006 55
ENST00000520773 ZNF300P1-002 processed_transcript Homo_sapiens 0.000001 60
ENST00000587921 ZNF235-002 retained_intron Homo_sapiens 0 1459
ENST00000594466 ZNF726-005 protein_coding Homo_sapiens 0.000001 60
ENST00000594803 ZNF671-006 processed_transcript Homo_sapiens 0.00003 53
ENST00000600125 ZNF671-004 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000613197 ZNF229-001 protein_coding Homo_sapiens 7e-36 158
ENST00000614049 ZNF229-002 protein_coding Homo_sapiens 6e-36 158
ENST00000616224 ZNF235-201 protein_coding Homo_sapiens 0 769
ENST00000620012 ZNF229-003 nonsense_mediated_decay Homo_sapiens 7e-36 158

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