C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth arrest-specific 2 like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056649 Gas2l1-001 ENSMUSG00000034201 10090 - 11:5060372-5065327 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056649
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056649 8.563±0.92 27.424±7.82 4.730±0.11 2.413±0.09 17.184±6.83 26.295±2.96 2.022±1.08 7.237±1.42 4.131±1.77 21.663±7.46 0.411±0.06 21.212±6.65 4.591±0.49 11.756±4.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VQ CIL_0003VQ_0002 CGP 11:4986824-5065327
CIL_0002LG CIL_0002LG_0002 CGP 11:5054132-5065327

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001578 ISS microtubule bundle formation
GO:0001725 IDA stress fiber
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IDA microtubule
GO:0007026 ISS negative regulation of microtubule depolymerization
GO:0007050 IEA cell cycle arrest
GO:0008017 ISS microtubule binding
GO:0008093 ISS cytoskeletal adaptor activity
GO:0009267 IDA cellular response to starvation
GO:0010629 ISS negative regulation of gene expression
GO:0030308 ISS negative regulation of cell growth
GO:0045647 ISS negative regulation of erythrocyte differentiation
GO:0046966 ISS thyroid hormone receptor binding
GO:0051726 ISS regulation of cell cycle
GO:0097067 ISS cellular response to thyroid hormone stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000406549 GAS2L1-002 protein_coding Homo_sapiens 0 625
ENST00000442849 GAS2L1P2-002 processed_transcript Homo_sapiens 0 209
ENST00000611648 GAS2L1-006 protein_coding Homo_sapiens 0 2124
ENST00000616432 GAS2L1-001 protein_coding Homo_sapiens 0 2128
ENST00000618518 GAS2L1-005 protein_coding Homo_sapiens 0 2128
ENST00000621062 GAS2L1-004 protein_coding Homo_sapiens 0 2128

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