C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4, sodium bicarbonate cotransporter, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057015 Slc4a7-201 ENSMUSG00000021733 10090 + 14:14703025-14799943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057015
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057015 3.826±0.50 4.879±1.81 4.119±0.98 5.830±4.38 2.324±0.71 8.791±0.98 0.932±0.50 0.859±0.17 0.870±0.29 1.753±0.60 0.292±0.08 4.273±1.12 0.959±0.49 5.764±1.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005452 IEA inorganic anion exchanger activity
GO:0006820 IEA anion transport
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0021747 IMP cochlear nucleus development
GO:0046666 IMP retinal cell programmed cell death
GO:0060117 IMP auditory receptor cell development
GO:0061299 IMP retina vasculature morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091923 SLC4A10 (2 of 2)-201 protein_coding Danio_rerio 0 294
ENST00000295736 SLC4A7-001 protein_coding Homo_sapiens 0 2981
ENST00000419036 SLC4A7-003 protein_coding Homo_sapiens 0 2887
ENST00000425128 SLC4A7-201 protein_coding Homo_sapiens 0 2959
ENST00000428005 SLC4A7-012 retained_intron Homo_sapiens 0 1199
ENST00000428179 SLC4A7-013 protein_coding Homo_sapiens 0 2704
ENST00000428386 SLC4A7-002 protein_coding Homo_sapiens 0 3923
ENST00000437179 SLC4A7-005 protein_coding Homo_sapiens 0 4004
ENST00000437266 SLC4A7-007 nonsense_mediated_decay Homo_sapiens 0 1947
ENST00000438530 SLC4A7-009 nonsense_mediated_decay Homo_sapiens 0 1947
ENST00000440156 SLC4A7-006 protein_coding Homo_sapiens 0 3225
ENST00000445684 SLC4A7-010 protein_coding Homo_sapiens 0 2981
ENST00000446700 SLC4A7-011 protein_coding Homo_sapiens 0 2981
ENST00000454389 SLC4A7-014 protein_coding Homo_sapiens 0 3225
ENST00000455077 SLC4A7-004 protein_coding Homo_sapiens 0 4248
ENST00000457377 SLC4A7-008 nonsense_mediated_decay Homo_sapiens 0 2191
ENST00000465487 SLC4A7-017 retained_intron Homo_sapiens 0 765
ENST00000491211 SLC4A7-015 retained_intron Homo_sapiens 0 289

Loading