C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: odd-skipped related 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057021 Osr1-201 ENSMUSG00000048387 10090 + 12:9574442-9581499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057021
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057021 6.479±1.83 1.007±0.49 22.682±4.55 1.195±0.69 6.660±3.43 3.218±0.42 1.821±1.00 0.657±0.19 0.165±0.12 4.800±1.00 0.623±0.16 1.979±0.90 0.373±0.33 0.490±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009D5 CIL_0009D5_0002 VISTA 12:9037517-9639601
CIL_0009D2 CIL_0009D2_0002 VISTA 12:9068203-9669315
CIL_0008YE CIL_0008YE_0002 VISTA 12:9250103-9851455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001655 IMP urogenital system development
GO:0001656 IMP metanephros development
GO:0001657 IMP ureteric bud development
GO:0001823 IMP mesonephros development
GO:0002062 IGI chondrocyte differentiation
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005730 ISS nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IMP heart development
GO:0008406 IMP gonad development
GO:0010628 IMP positive regulation of gene expression
GO:0030154 IGI cell differentiation
GO:0030501 IGI positive regulation of bone mineralization
GO:0030857 IMP negative regulation of epithelial cell differentiation
GO:0035115 IGI embryonic forelimb morphogenesis
GO:0035116 IGI embryonic hindlimb morphogenesis
GO:0036023 IGI embryonic skeletal limb joint morphogenesis
GO:0042474 IGI middle ear morphogenesis
GO:0042476 IGI odontogenesis
GO:0042733 IGI embryonic digit morphogenesis
GO:0043066 IMP negative regulation of apoptotic process
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048389 IMP intermediate mesoderm development
GO:0048793 ISS pronephros development
GO:0048863 IDA stem cell differentiation
GO:0050679 IGI positive regulation of epithelial cell proliferation
GO:0060021 IGI palate development
GO:0060272 IGI embryonic skeletal joint morphogenesis
GO:0071300 IEP cellular response to retinoic acid
GO:0072075 IDA metanephric mesenchyme development
GO:0072111 IMP cell proliferation involved in kidney development
GO:0072133 IMP metanephric mesenchyme morphogenesis
GO:0072143 IMP mesangial cell development
GO:0072162 IMP metanephric mesenchymal cell differentiation
GO:0072166 IMP posterior mesonephric tubule development
GO:0072168 IMP specification of anterior mesonephric tubule identity
GO:0072169 IMP specification of posterior mesonephric tubule identity
GO:0072180 IMP mesonephric duct morphogenesis
GO:0072183 IMP negative regulation of nephron tubule epithelial cell differentiation
GO:0072184 IMP renal vesicle progenitor cell differentiation
GO:0072190 IMP ureter urothelium development
GO:0072207 IMP metanephric epithelium development
GO:0072208 IMP metanephric smooth muscle tissue development
GO:0072234 IMP metanephric nephron tubule development
GO:0072239 IMP metanephric glomerulus vasculature development
GO:0072259 IMP metanephric interstitial fibroblast development
GO:0072268 IMP pattern specification involved in metanephros development
GO:0072498 IGI embryonic skeletal joint development
GO:0090094 IMP metanephric cap mesenchymal cell proliferation involved in metanephros development
GO:2000543 ISS positive regulation of gastrulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272223 OSR1-001 protein_coding Homo_sapiens 0 1253
ENST00000487581 OSR1-002 retained_intron Homo_sapiens 0 1114

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