C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: JNK1/MAPK8-associated membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057257 Jkamp-002 ENSMUSG00000005078 10090 + 12:72085857-72100861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057257
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057257 12.631±0.99 8.050±1.65 8.105±2.23 8.744±4.87 8.680±1.87 4.752±1.24 5.395±1.44 10.333±1.07 3.949±0.49 9.238±0.95 2.308±0.54 9.553±3.01 8.756±4.76 4.047±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AS CIL_0005AS_0002 CGP 12:72073428-72101461
CIL_0004VY CIL_0004VY_0002 CGP 12:72085589-72185029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006986 IEA response to unfolded protein
GO:0016021 IEA integral component of membrane
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261247 JKAMP-001 protein_coding Homo_sapiens 0 1146
ENST00000356057 JKAMP-201 protein_coding Homo_sapiens 0 1062
ENST00000425728 JKAMP-002 protein_coding Homo_sapiens 0 1064
ENST00000553647 JKAMP-012 retained_intron Homo_sapiens 0 335
ENST00000553941 JKAMP-007 retained_intron Homo_sapiens 0 1098
ENST00000554271 JKAMP-003 protein_coding Homo_sapiens 0 1096
ENST00000554721 JKAMP-006 retained_intron Homo_sapiens 0 950
ENST00000554754 JKAMP-010 processed_transcript Homo_sapiens 0 473
ENST00000554795 JKAMP-004 protein_coding Homo_sapiens 0 802
ENST00000555491 JKAMP-011 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000556985 JKAMP-013 protein_coding Homo_sapiens 0 590
ENST00000557560 JKAMP-009 processed_transcript Homo_sapiens 0 473
ENST00000602482 JKAMP-014 retained_intron Homo_sapiens 0 1098
ENST00000616435 JKAMP-202 protein_coding Homo_sapiens 0 767

Loading