C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibulin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057410 Fbln1-001 ENSMUSG00000006369 10090 + 15:85205949-85286535 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057410 14.427±9.58 3.997±0.27 82.548±25.94 1.220±0.65 5.324±2.59 21.648±5.72 12.381±1.44 2.654±0.66 0.245±0.12 19.862±2.63 0.676±0.20 14.520±4.28 14.894±13.31 0.616±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054F CIL_00054F_0002 CGP 15:85132099-85286535
CIL_0008KW CIL_0008KW_0002 VISTA 15:85164142-85764949
CIL_00054E CIL_00054E_0002 CGP 15:85205949-85463836

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005604 IDA basement membrane
GO:0005615 IEA extracellular space
GO:0007566 IEA embryo implantation
GO:0010952 IDA positive regulation of peptidase activity
GO:0016504 IDA peptidase activator activity
GO:0030198 IDA extracellular matrix organization
GO:0031012 IEA extracellular matrix
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262722 FBLN1-003 protein_coding Homo_sapiens 0 1701
ENST00000327858 FBLN1-001 protein_coding Homo_sapiens 0 2109
ENST00000340923 FBLN1-019 protein_coding Homo_sapiens 0 1698
ENST00000402984 FBLN1-002 protein_coding Homo_sapiens 0 1572
ENST00000437711 FBLN1-012 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000442170 FBLN1-004 protein_coding Homo_sapiens 0 1700
ENST00000451475 FBLN1-011 protein_coding Homo_sapiens 0 335
ENST00000460538 FBLN1-013 retained_intron Homo_sapiens 0 339
ENST00000465578 FBLN1-014 retained_intron Homo_sapiens 0 228
ENST00000484531 FBLN1-015 retained_intron Homo_sapiens 0 374

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