C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transcription factor 25 (basic helix-loop-helix) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000057934  |
Tcf25-201 |
ENSMUSG00000001472 |
10090 | + |
8:123373824-123401892  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00005J | CIL_00005J_0002 | CGP | 8:123332713-123404173 |
| CIL_0006AO | CIL_0006AO_0003 | CGP | 8:123373824-123410742 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | ISS | negative regulation of transcription from RNA polymerase II promoter |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | ISS | sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000263346
|
TCF25-001 | protein_coding | Homo_sapiens | 0 | 2178 |
|
ENST00000263347
|
TCF25-201 | protein_coding | Homo_sapiens | 0 | 1940 |
|
ENST00000561585
|
TCF25-002 | retained_intron | Homo_sapiens | 0 | 324 |
|
ENST00000561958
|
TCF25-012 | protein_coding | Homo_sapiens | 0 | 582 |
|
ENST00000562184
|
TCF25-017 | retained_intron | Homo_sapiens | 0 | 689 |
|
ENST00000562193
|
TCF25-023 | protein_coding | Homo_sapiens | 0 | 442 |
|
ENST00000562256
|
TCF25-004 | protein_coding | Homo_sapiens | 0 | 1541 |
|
ENST00000563032
|
TCF25-009 | processed_transcript | Homo_sapiens | 0 | 219 |
|
ENST00000563636
|
TCF25-018 | retained_intron | Homo_sapiens | 0 | 595 |
|
ENST00000564652
|
TCF25-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 217 |
|
ENST00000565196
|
TCF25-011 | protein_coding | Homo_sapiens | 0 | 542 |
|
ENST00000566158
|
TCF25-019 | retained_intron | Homo_sapiens | 0 | 235 |
|
ENST00000568409
|
TCF25-016 | protein_coding | Homo_sapiens | 0 | 686 |
|
ENST00000570116
|
TCF25-005 | retained_intron | Homo_sapiens | 0 | 617 |
|
ENST00000614813
|
TCF25-027 | protein_coding | Homo_sapiens | 0 | 619 |
