C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 25 (basic helix-loop-helix)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263346 TCF25-001 ENSG00000141002 9606 + 16:89873612-89911384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263346
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263346 46.143±0.00 56.031±0.00 32.502±23.07 51.269±0.00 13.994±9.54 12.697±11.73 17.130±13.61 11.167±7.96 49.309±0.00 44.566±0.00 42.471±39.56 57.591±12.08 47.123±7.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005J CIL_00005J_0001 CGP 16:89818179-89911384
CIL_0006AO CIL_0006AO_0002 CGP 16:89873586-89920977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007507 NAS heart development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057934 Tcf25-201 protein_coding Mus_musculus 0 2178
ENSMUST00000108840 Tcf25-202 protein_coding Mus_musculus 0 2002

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