C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance deficient 2 mitotin (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058011 Mcm2-201 ENSMUSG00000002870 10090 - 6:88883475-88898780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058011 8.549±5.84 16.237±1.71 5.676±1.49 10.646±7.49 6.972±2.09 11.114±0.76 2.071±0.26 3.895±0.77 37.926±44.12 4.803±1.09 2.218±0.38 22.985±5.98 24.081±14.50 3.233±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EC CIL_0008EC_0002 VISTA 6:88734676-89336253

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IEA chromatin
GO:0003678 IEA DNA helicase activity
GO:0003688 IDA DNA replication origin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005664 IDA nuclear origin of replication recognition complex
GO:0005737 IEA cytoplasm
GO:0006268 IDA DNA unwinding involved in DNA replication
GO:0006270 TAS DNA replication initiation
GO:0006334 IDA nucleosome assembly
GO:0007049 IEA cell cycle
GO:0015630 IEA microtubule cytoskeleton
GO:0042393 IDA histone binding
GO:0042555 ISS MCM complex
GO:0046872 IEA metal ion binding
GO:0071353 IDA cellular response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000049626 mcm2-202 protein_coding Danio_rerio 0 1408
ENST00000265056 MCM2-001 protein_coding Homo_sapiens 0 3168
ENST00000468414 MCM2-010 processed_transcript Homo_sapiens 0 941
ENST00000468659 MCM2-009 processed_transcript Homo_sapiens 0 597
ENST00000474964 MCM2-002 nonsense_mediated_decay Homo_sapiens 0 3081
ENST00000477668 MCM2-003 nonsense_mediated_decay Homo_sapiens 0 2034
ENST00000491422 MCM2-005 protein_coding Homo_sapiens 0 1522

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