C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: defensin beta 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058086 Defb36-001 ENSMUSG00000044863 10090 + 2:152604327-152612729 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000058086
Transcript ID Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000058086 0.361±0.18 0.287±0.00 0.149±0.04 0.137±0.01 0.170±0.05 0.036±0.00 0.299±0.05 0.092±0.06 49.134±15.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001A6 CIL_0001A6_0002 CGP 2:152604327-152623053

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process
GO:0042742 IEA defense response to bacterium

Homologs

No Homologs available.

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