C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP glucuronosyltransferase 1 family, polypeptide A7C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058237 Ugt1a7c-001 ENSMUSG00000090124 10090 + 1:88095064-88220002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000058237
Transcript ID Adipose Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058237 5.282±0.60 0.220±0.04 28.542±9.53 0.501±0.00 0.982±0.08 4.393±0.33 0.076±0.03 5.105±1.74 0.318±0.20 2.356±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HK CIL_0007HK_0002 CGP 1:87945119-88219004
CIL_0004L1 CIL_0004L1_000I CGP 1:88055388-88219004
CIL_0004L1 CIL_0004L1_000J CGP 1:88070800-88219004
CIL_0004L1 CIL_0004L1_000E CGP 1:88087813-88220002
CIL_0004L1 CIL_0004L1_000G CGP 1:88095062-88220002

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0008152 IEA metabolic process
GO:0015020 IEA glucuronosyltransferase activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305139 UGT1A6-001 protein_coding Homo_sapiens 0 850
ENST00000305208 UGT1A8-001 protein_coding Homo_sapiens 0 852
ENST00000344644 UGT1A10-001 protein_coding Homo_sapiens 0 1197
ENST00000354728 UGT1A9-001 protein_coding Homo_sapiens 0 1258
ENST00000373409 UGT1A4-001 protein_coding Homo_sapiens 0 863
ENST00000373414 UGT1A5-001 protein_coding Homo_sapiens 0 863
ENST00000373424 UGT1A6-003 protein_coding Homo_sapiens 0 841
ENST00000373426 UGT1A7-001 protein_coding Homo_sapiens 0 1208
ENST00000373450 UGT1A1-001 protein_coding Homo_sapiens 0 1219
ENST00000446481 UGT1A6-004 nonsense_mediated_decay Homo_sapiens 7e-24 115
ENST00000450233 UGT1A4-002 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000482026 UGT1A3-001 protein_coding Homo_sapiens 0 863

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