C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 17 receptor C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058300 Il17rc-002 ENSMUSG00000030281 10090 + 6:113471427-113483140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058300
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058300 8.284±4.57 12.732±1.36 12.906±0.93 0.374±0.00 14.400±7.72 71.796±6.00 5.197±0.93 5.029±3.24 12.198±4.18 0.733±0.00 12.115±5.80 1.446±0.00 0.519±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AC CIL_0001AC_0002 CGP 6:113458484-113483140
CIL_000599 CIL_000599_0002 CGP 6:113471427-113493338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0030368 IEA interleukin-17 receptor activity
GO:1900017 IGI positive regulation of cytokine production involved in inflammatory response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295981 IL17RC-001 protein_coding Homo_sapiens 0 477
ENST00000383812 IL17RC-014 protein_coding Homo_sapiens 0 889
ENST00000403601 IL17RC-019 protein_coding Homo_sapiens 0 534
ENST00000412901 IL17RC-017 nonsense_mediated_decay Homo_sapiens 8e-40 169
ENST00000413608 IL17RC-020 protein_coding Homo_sapiens 0 737
ENST00000416074 IL17RC-201 protein_coding Homo_sapiens 0 555
ENST00000424206 IL17RC-028 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000434756 IL17RC-009 nonsense_mediated_decay Homo_sapiens 3.00018e-42 176
ENST00000436503 IL17RC-011 protein_coding Homo_sapiens 0 327
ENST00000438091 IL17RC-010 protein_coding Homo_sapiens 0 285
ENST00000451165 IL17RC-016 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000451231 IL17RC-021 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000451271 IL17RC-006 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000455057 IL17RC-022 protein_coding Homo_sapiens 0 586
ENST00000461995 IL17RC-029 retained_intron Homo_sapiens 0 477
ENST00000464406 IL17RC-030 retained_intron Homo_sapiens 0 189
ENST00000466046 IL17RC-018 retained_intron Homo_sapiens 0 532
ENST00000476810 IL17RC-008 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000483582 IL17RC-002 retained_intron Homo_sapiens 0 889
ENST00000494365 IL17RC-003 retained_intron Homo_sapiens 0 532
ENST00000497387 IL17RC-007 retained_intron Homo_sapiens 0 560
ENST00000498214 IL17RC-004 processed_transcript Homo_sapiens 0 333

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