C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OTU domain containing 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058476 Otud7a-001 ENSMUSG00000033510 10090 + 7:63444751-63759028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058476
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058476 0.055±0.02 0.058±0.03 0.046±0.00 1.142±0.35 0.046±0.03 0.106±0.04 0.018±0.00 0.024±0.01 0.014±0.01 0.050±0.01 0.021±0.00 0.115±0.06 0.024±0.01 1.162±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ON CIL_0006ON_0002 CGP 7:63444751-63938915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0035871 ISS protein K11-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000156751 OTUD7A-001 protein_coding Danio_rerio 0 1114
ENSDART00000012677 OTUD7A-201 protein_coding Danio_rerio 0 992
ENST00000307050 OTUD7A-001 protein_coding Homo_sapiens 0 3435
ENST00000417191 OTUD7B-003 protein_coding Homo_sapiens 0 422
ENST00000558371 OTUD7A-003 retained_intron Homo_sapiens 0 904
ENST00000560536 OTUD7A-002 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000560598 OTUD7A-004 protein_coding Homo_sapiens 0 701
ENST00000562954 ARHGAP11B-008 processed_transcript Homo_sapiens 0 243
ENST00000581312 OTUD7B-001 protein_coding Homo_sapiens 0 484
ENST00000602616 ARHGAP11B-007 processed_transcript Homo_sapiens 0 357

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