C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058534 Med26-201 ENSMUSG00000045248 10090 - 8:72494558-72548310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058534 4.010±1.36 6.366±1.19 4.305±0.81 4.510±1.80 4.839±1.71 5.428±0.49 2.563±0.29 2.796±0.51 2.927±1.07 4.832±0.81 1.050±0.35 9.408±2.98 4.949±2.87 33.506±12.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G5 CIL_0006G5_0002 CGP 8:72480641-72548310
CIL_0006M0 CIL_0006M0_0002 CGP 8:72494558-72571088

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 ISS RNA polymerase II transcription cofactor activity
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0016592 ISS mediator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263390 MED26-001 protein_coding Homo_sapiens 0 1134
ENST00000409035 CTD-3222D19.2-001 nonsense_mediated_decay Homo_sapiens 0 1020
ENST00000597244 MED26-003 retained_intron Homo_sapiens 0 782
ENST00000600060 MED26-007 protein_coding Homo_sapiens 0 398
ENST00000611692 MED26-201 protein_coding Homo_sapiens 0 774

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