C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon kappa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058595 Ifnk-001 ENSMUSG00000042993 10090 + 4:35152056-35154005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000058595
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000058595 0.065±0.01 0.064±0.00 0.163±0.09 0.196±0.01 0.049±0.00 0.062±0.00 0.100±0.01 0.166±0.00 0.032±0.00 1.884±2.25 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061M CIL_00061M_0002 CGP 4:34949074-35157484
CIL_00061J CIL_00061J_0002 CGP 4:35152056-35226175

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002250 IBA adaptive immune response
GO:0002286 IBA T cell activation involved in immune response
GO:0002323 IBA natural killer cell activation involved in immune response
GO:0005125 IBA cytokine activity
GO:0005132 IBA type I interferon receptor binding
GO:0005615 IBA extracellular space
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006959 IBA humoral immune response
GO:0009615 IEA response to virus
GO:0019221 IBA cytokine-mediated signaling pathway
GO:0030183 IBA B cell differentiation
GO:0033141 IBA positive regulation of peptidyl-serine phosphorylation of STAT protein
GO:0042100 IBA B cell proliferation
GO:0043330 IBA response to exogenous dsRNA
GO:0045087 IBA innate immune response
GO:0045343 IBA regulation of MHC class I biosynthetic process
GO:0051607 IEA defense response to virus

Homologs

No Homologs available.

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