C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aryl hydrocarbon receptor-interacting protein-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059082 Aipl1-002 ENSMUSG00000040554 10090 - 11:72028717-72037509 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059082
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059082 0.042±0.00 0.033±0.00 0.034±0.01 0.065±0.00 0.019±0.01 0.015±0.00 0.015±0.01 0.053±0.03 0.021±0.01 0.148±0.09 0.033±0.01 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000P5 CIL_0000P5_0002 CGP 11:71749920-72037509
CIL_0000RM CIL_0000RM_0002 CGP 11:72027963-72047370

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001895 IMP retina homeostasis
GO:0001917 IDA photoreceptor inner segment
GO:0006457 IEA protein folding
GO:0007603 IMP phototransduction, visible light
GO:0030823 IMP regulation of cGMP metabolic process
GO:0043066 IMP negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250087 AIPL1-002 protein_coding Homo_sapiens 0 337
ENST00000381128 AIPL1-007 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000381129 AIPL1-001 protein_coding Homo_sapiens 0 494
ENST00000570466 AIPL1-004 protein_coding Homo_sapiens 0 346
ENST00000571740 AIPL1-009 protein_coding Homo_sapiens 0 492
ENST00000574506 AIPL1-006 protein_coding Homo_sapiens 0 357
ENST00000574913 AIPL1-010 protein_coding Homo_sapiens 0 484
ENST00000575265 AIPL1-008 protein_coding Homo_sapiens 0 494
ENST00000576307 AIPL1-003 protein_coding Homo_sapiens 0 337
ENST00000576776 AIPL1-005 protein_coding Homo_sapiens 0 494
ENST00000621374 AIPL1-201 protein_coding Homo_sapiens 0 494

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