C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulon 4 receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059589 Rtn4r-001 ENSMUSG00000043811 10090 + 16:18127642-18152408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059589
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059589 1.043±0.70 0.209±0.06 2.141±0.13 16.302±0.26 3.540±1.53 10.399±2.09 12.072±2.91 7.569±1.37 0.251±0.29 0.420±0.07 0.070±0.03 1.951±0.90 1.386±0.74 0.054±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0007409 IDA axonogenesis
GO:0009986 IEA cell surface
GO:0030426 IDA growth cone
GO:0031225 IEA anchored component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000043402 RTN4R-001 protein_coding Homo_sapiens 0 1735
ENST00000416372 RTN4R-002 protein_coding Homo_sapiens 0 1517
ENST00000425986 RTN4R-003 protein_coding Homo_sapiens 0 1507

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