C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110037F02 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059914 1110037F02Rik-001 ENSMUSG00000040720 10090 + 4:11485958-11550684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059914
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059914 7.836±2.05 5.763±0.58 6.558±0.53 7.514±1.13 4.491±1.68 4.496±0.27 1.482±0.59 3.850±0.94 3.666±1.26 5.451±1.57 1.973±0.22 7.097±2.79 14.084±4.66 4.795±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BS CIL_0002BS_0002 CGP 4:11331933-11550684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297591 KIAA1429-001 protein_coding Homo_sapiens 0 7452
ENST00000421249 KIAA1429-002 protein_coding Homo_sapiens 0 4342
ENST00000517624 KIAA1429-008 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000519001 KIAA1429-009 processed_transcript Homo_sapiens 0 318
ENST00000521080 KIAA1429-005 retained_intron Homo_sapiens 0 2052
ENST00000522196 KIAA1429-010 retained_intron Homo_sapiens 0 593
ENST00000522263 KIAA1429-004 nonsense_mediated_decay Homo_sapiens 0 2876
ENST00000523263 KIAA1429-007 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000523405 KIAA1429-006 processed_transcript Homo_sapiens 0 527

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