C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HEN1 methyltransferase homolog 1 (Arabidopsis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059946 Henmt1-001 ENSMUSG00000045662 10090 + 3:108940084-108960676 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000059946
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000059946 0.082±0.03 0.015±0.00 0.265±0.02 0.145±0.00 0.052±0.02 0.043±0.02 0.064±0.01 0.284±0.15 0.098±0.03 7.929±3.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EQ CIL_0007EQ_0002 CGP 3:108940084-109027607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001510 IDA RNA methylation
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008171 IDA O-methyltransferase activity
GO:0008173 IDA RNA methyltransferase activity
GO:0031047 IEA gene silencing by RNA
GO:0034587 IDA piRNA metabolic process
GO:0043186 ISS P granule
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370031 HENMT1-003 protein_coding Homo_sapiens 0 580
ENST00000370032 HENMT1-001 protein_coding Homo_sapiens 0 667
ENST00000402983 HENMT1-201 protein_coding Homo_sapiens 0 667
ENST00000420055 HENMT1-002 protein_coding Homo_sapiens 0 614
ENST00000483729 HENMT1-005 processed_transcript Homo_sapiens 0 305
ENST00000493676 HENMT1-004 processed_transcript Homo_sapiens 0 455

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