C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidic acid receptor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060576 Lpar4-001 ENSMUSG00000049929 10090 + X:106920625-106933900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060576
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060576 2.153±0.18 0.466±0.37 0.533±0.05 1.140±0.67 1.297±0.60 0.093±0.04 0.463±0.05 0.340±0.08 0.523±0.37 0.702±0.34 0.131±0.03 1.514±0.63 1.232±0.48 0.040±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z4 CIL_0001Z4_0002 CGP X:106837082-106933900
CIL_0000C1 CIL_0000C1_0002 CGP X:106920625-107104974

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0008289 IEA lipid binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000435339 LPAR4-001 protein_coding Homo_sapiens 0 1799
ENST00000514744 LPAR4-002 protein_coding Homo_sapiens 0 322
ENST00000607964 LPAR4-003 processed_transcript Homo_sapiens 7e-37 158
ENST00000610214 LPAR4-004 processed_transcript Homo_sapiens 1e-36 158
ENST00000614823 LPAR4-201 protein_coding Homo_sapiens 0 1808

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