C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannoside acetylglucosaminyltransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060579 Mgat2-001 ENSMUSG00000043998 10090 + 12:69184157-69186770 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060579
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060579 15.278±4.70 24.583±4.23 13.029±1.61 6.860±1.19 14.051±4.07 15.432±1.60 4.196±0.17 21.743±2.10 10.546±2.85 14.030±1.96 2.232±0.19 24.708±3.12 26.848±3.53 8.046±1.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q5 CIL_0005Q5_0002 CGP 12:69182731-69186770
CIL_0006CH CIL_0006CH_0002 CGP 12:69184157-69198429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005795 IEA Golgi stack
GO:0006487 IEA protein N-linked glycosylation
GO:0008455 IMP alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0009312 IEA oligosaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0018279 IMP protein N-linked glycosylation via asparagine
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000125310 si:ch73-91k6.2-201 protein_coding Danio_rerio 4e-16 92
ENSDART00000151426 si:ch73-91k6.2-001 protein_coding Danio_rerio 4e-16 92
ENST00000305386 MGAT2-001 protein_coding Homo_sapiens 0 2422
ENST00000427194 RP13-36C9.5-001 processed_pseudogene Homo_sapiens 0 372
ENST00000449718 RP13-36C9.4-001 processed_pseudogene Homo_sapiens 0 379

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