C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUB domain containing protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062495 Cdcp2-001 ENSMUSG00000047636 10090 + 4:107096891-107107748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062495
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062495 0.053±0.01 0.030±0.01 0.003±0.00 0.012±0.00 0.019±0.01 0.012±0.00 0.002±0.00 0.013±0.01 0.022±0.00 0.032±0.01 0.028±0.01 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0002 VISTA 4:106564211-107167561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311841 RP11-446E24.4-001 nonsense_mediated_decay Homo_sapiens 0 538
ENST00000371330 CDCP2-001 protein_coding Homo_sapiens 0 1445
ENST00000525949 RP11-446E24.4-002 processed_transcript Homo_sapiens 0 315

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