C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intersectin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062580 Itsn2-201 ENSMUSG00000020640 10090 + 12:4593008-4713950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062580
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062580 4.474±1.49 8.113±3.71 7.283±1.79 5.062±3.78 6.288±2.41 3.963±0.75 2.458±0.59 4.859±1.42 3.330±1.44 7.442±1.72 1.416±0.49 5.140±3.30 8.917±4.24 3.075±1.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0006897 IEA endocytosis
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000087111 itsn2b-001 protein_coding Danio_rerio 0 617
ENST00000355123 ITSN2-001 protein_coding Homo_sapiens 0 3655
ENST00000361999 ITSN2-002 protein_coding Homo_sapiens 0 3655
ENST00000406921 ITSN2-004 protein_coding Homo_sapiens 0 2543
ENST00000407704 ITSN2-006 processed_transcript Homo_sapiens 0 590
ENST00000412011 ITSN2-003 protein_coding Homo_sapiens 0 1351
ENST00000427234 ITSN2-010 nonsense_mediated_decay Homo_sapiens 0 787
ENST00000443927 ITSN2-012 protein_coding Homo_sapiens 0 760
ENST00000449392 ITSN2-011 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000478720 ITSN2-005 retained_intron Homo_sapiens 0 713
ENST00000622089 ITSN2-201 protein_coding Homo_sapiens 0 3655

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