C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: galactose-3-O-sulfotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063004 Gal3st1-002 ENSMUSG00000049721 10090 + 11:3983713-3999315 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000063004
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000063004 0.271±0.15 0.225±0.00 0.339±0.17 0.455±0.17 12.492±2.53 0.248±0.12 6.302±1.72 0.570±0.48 2.674±1.03 0.141±0.05 0.353±0.13 0.974±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F8 CIL_0006F8_0002 CGP 11:3963975-3999326

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001733 IDA galactosylceramide sulfotransferase activity
GO:0006682 IDA galactosylceramide biosynthetic process
GO:0007283 IMP spermatogenesis
GO:0009247 TAS glycolipid biosynthetic process
GO:0016021 ISS integral component of membrane
GO:0042552 IMP myelination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338911 GAL3ST1-201 protein_coding Homo_sapiens 0 1192
ENST00000401975 GAL3ST1-001 protein_coding Homo_sapiens 0 1192
ENST00000402321 GAL3ST1-003 protein_coding Homo_sapiens 0 1192
ENST00000402369 GAL3ST1-004 protein_coding Homo_sapiens 0 1192
ENST00000406361 GAL3ST1-002 protein_coding Homo_sapiens 0 1192
ENST00000406955 GAL3ST1-005 protein_coding Homo_sapiens 0 1192
ENST00000416358 GAL3ST1-012 protein_coding Homo_sapiens 0 403
ENST00000423299 GAL3ST1-016 protein_coding Homo_sapiens 0 372
ENST00000423371 GAL3ST1-011 protein_coding Homo_sapiens 0 233
ENST00000427899 GAL3ST1-018 protein_coding Homo_sapiens 0 377
ENST00000428682 GAL3ST1-009 protein_coding Homo_sapiens 0 222
ENST00000431313 GAL3ST1-007 protein_coding Homo_sapiens 0 693
ENST00000437282 GAL3ST1-020 protein_coding Homo_sapiens 0 496
ENST00000441967 GAL3ST1-023 protein_coding Homo_sapiens 0 758
ENST00000443136 GAL3ST1-015 protein_coding Homo_sapiens 0 359
ENST00000452827 GAL3ST1-017 protein_coding Homo_sapiens 0 640
ENST00000453479 GAL3ST1-021 protein_coding Homo_sapiens 0 213

Loading