C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 22a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063414 Tbc1d22a-201 ENSMUSG00000051864 10090 + 15:86214459-86498503 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063414 12.760±3.39 12.846±4.11 9.672±1.13 5.680±1.20 13.163±2.35 15.987±4.17 7.745±1.40 12.325±0.90 5.434±1.65 10.878±4.13 5.085±0.45 12.355±4.73 6.812±3.29 5.601±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BF CIL_0008BF_0002 VISTA 15:85812646-86415385
CIL_00025D CIL_00025D_0002 CGP 15:86139128-86498503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042803 ISS protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337137 TBC1D22A-001 protein_coding Homo_sapiens 0 1753
ENST00000355704 TBC1D22A-003 protein_coding Homo_sapiens 0 1098
ENST00000373491 TBC1D22B-001 protein_coding Homo_sapiens 0 322
ENST00000380995 TBC1D22A-201 protein_coding Homo_sapiens 0 1500
ENST00000394449 TBC1D22A-004 nonsense_mediated_decay Homo_sapiens 0 1003
ENST00000406733 TBC1D22A-006 protein_coding Homo_sapiens 0 1578
ENST00000407381 TBC1D22A-002 protein_coding Homo_sapiens 0 1098
ENST00000441162 TBC1D22A-005 nonsense_mediated_decay Homo_sapiens 0 911
ENST00000441936 TBC1D22A-008 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000472791 TBC1D22A-009 processed_transcript Homo_sapiens 0 313
ENST00000486163 TBC1D22A-010 processed_transcript Homo_sapiens 0 257
ENST00000496139 TBC1D22A-007 processed_transcript Homo_sapiens 9.94922e-44 180

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