C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase D family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063888 Pld4-201 ENSMUSG00000052160 10090 + 12:112760655-112768986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063888 24.535±7.22 13.048±1.41 14.381±1.00 1.710±0.26 55.011±12.62 10.809±2.64 4.635±1.43 7.078±1.00 8.684±3.01 30.177±1.66 1.001±0.88 15.015±5.14 1.536±1.76 0.813±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HL CIL_0001HL_0002 CGP 12:112722174-112768986

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006909 IMP phagocytosis
GO:0016021 IEA integral component of membrane
GO:0016042 IEA lipid catabolic process
GO:0032588 IDA trans-Golgi network membrane
GO:0045335 IDA phagocytic vesicle
GO:0070290 IEA N-acylphosphatidylethanolamine-specific phospholipase D activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392593 PLD4-001 protein_coding Homo_sapiens 0 1061
ENST00000540372 PLD4-004 protein_coding Homo_sapiens 0 1061
ENST00000557573 PLD4-005 protein_coding Homo_sapiens 0 492

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