C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Eph receptor A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064405 Epha3-201 ENSMUSG00000052504 10090 - 16:63543538-63864158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064405
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064405 0.771±0.69 0.233±0.05 2.046±0.07 8.133±5.15 1.275±0.46 0.213±0.06 0.151±0.04 0.421±0.08 0.302±0.13 1.781±0.49 0.040±0.02 1.282±0.29 0.216±0.20 0.183±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005003 IDA ephrin receptor activity
GO:0005004 IEA GPI-linked ephrin receptor activity
GO:0005524 IEA ATP binding
GO:0005769 IEA early endosome
GO:0010976 IEA positive regulation of neuron projection development
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0032319 IEA regulation of Rho GTPase activity
GO:0032956 IEA regulation of actin cytoskeleton organization
GO:0051893 IEA regulation of focal adhesion assembly
GO:0070507 IEA regulation of microtubule cytoskeleton organization
GO:0071300 IEA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000006787 epha3-001 protein_coding Danio_rerio 0 941
ENSDART00000156185 ephb2a-201 protein_coding Danio_rerio 0 372
ENSDART00000148120 ephb2a-001 protein_coding Danio_rerio 0 372
ENSDART00000042984 epha6-201 protein_coding Danio_rerio 0 331
ENSDART00000146042 epha6-002 protein_coding Danio_rerio 0 305
ENSDART00000146530 epha6-001 protein_coding Danio_rerio 0 272
ENST00000336596 EPHA3-001 protein_coding Homo_sapiens 0 4451
ENST00000452448 EPHA3-003 protein_coding Homo_sapiens 0 2141
ENST00000494014 EPHA3-002 protein_coding Homo_sapiens 0 3482

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