C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 103
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064637 Rnf103-001 ENSMUSG00000052656 10090 + 6:71493894-71510881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064637 6.647±1.56 25.884±7.29 13.350±0.52 6.844±3.66 13.096±6.64 37.426±5.91 3.786±0.96 9.508±2.14 11.170±5.42 11.902±3.76 3.843±0.84 17.384±9.25 9.942±5.07 2.424±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005783 ISS endoplasmic reticulum
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030433 IEA ER-associated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237455 RNF103-001 protein_coding Homo_sapiens 0 3563
ENST00000439940 CHMP3-201 protein_coding Homo_sapiens 0 230
ENST00000440757 RNF103-CHMP3-001 protein_coding Homo_sapiens 0 547
ENST00000463333 RNF103-006 processed_transcript Homo_sapiens 0 436
ENST00000465629 RNF103-003 retained_intron Homo_sapiens 0 540
ENST00000472030 RNF103-002 retained_intron Homo_sapiens 0 3027
ENST00000472680 RNF103-004 processed_transcript Homo_sapiens 0 438
ENST00000477307 RNF103-005 processed_transcript Homo_sapiens 0 1797
ENST00000604011 RNF103-CHMP3-002 protein_coding Homo_sapiens 0 224

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