C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: extra spindle pole bodies 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064924 Espl1-201 ENSMUSG00000058290 10090 + 15:102296293-102324356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064924
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064924 0.680±0.21 0.397±0.05 0.163±0.00 1.977±1.54 0.555±0.26 2.127±1.09 0.158±0.00 0.188±0.01 3.668±4.21 0.386±0.16 0.062±0.05 2.473±1.14 2.680±2.14 7.458±3.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QS CIL_0001QS_0002 CGP 15:102279456-102324356
CIL_0001IH CIL_0001IH_0002 CGP 15:102296293-102331873

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000070 IMP mitotic sister chromatid segregation
GO:0000212 IMP meiotic spindle organization
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0006508 IEA proteolysis
GO:0007059 IGI chromosome segregation
GO:0007067 IGI mitotic nuclear division
GO:0007127 IMP meiosis I
GO:0008233 IDA peptidase activity
GO:0008234 IDA cysteine-type peptidase activity
GO:0045143 IMP homologous chromosome segregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257934 ESPL1-201 protein_coding Homo_sapiens 0 5216
ENST00000521595 RP11-98H4.4-001 processed_pseudogene Homo_sapiens 0 254
ENST00000535123 ESPL1-008 retained_intron Homo_sapiens 0 721
ENST00000549154 ESPL1-003 retained_intron Homo_sapiens 0 1118
ENST00000550026 ESPL1-004 processed_transcript Homo_sapiens 3e-35 152
ENST00000552462 ESPL1-002 protein_coding Homo_sapiens 0 5184
ENST00000552671 ESPL1-001 nonsense_mediated_decay Homo_sapiens 0 5158
ENST00000553016 ESPL1-005 retained_intron Homo_sapiens 0 534

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